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APO: Unsupervised Atomic Policy Optimization for 3D Structure Prediction of Atomic Systems

arXiv cs.LG Bioinformatics AI Shentong Mo, Yatao Bian 2026-07-30
Representative image for APO: Unsupervised Atomic Policy Optimization for 3D Structure Prediction of Atomic Systems

TL;DR - APO is an unsupervised alignment framework for predicting 3D atomic structures without ground-truth coordinates. It reportedly improves crystal and antibody structure prediction while reducing inference costs.

  • Adapts group-relative policy optimization to 3D atomic environments.
  • Combines rewards for dominant latent structural modes and thermodynamic stability.
  • Selects physically plausible configurations from sampled groups, enabling self-correction.
  • Reportedly surpasses supervised baselines in match rates and structural fidelity while straightening probability paths for faster inference.

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