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MedDeID enables locally governed clinical-text de-identification from real or synthetic training data

arXiv cs.CL Medical/Healthcare AI Stig Hellemans, Tom Stroobants, Elyne Scheurwegs, Pieter Meysman, Philippe G. Jorens, Kris Laukens 2026-09-09
Representative image for MedDeID enables locally governed clinical-text de-identification from real or synthetic training data

TL;DR - MedDeID is an on-premises framework for training and deploying clinical-text de-identification models using real or synthetic notes. Its synthetic-only models achieved strong identifier recall, offering institutions a path to reuse sensitive clinical data without transferring it externally.

  • A compact transformer trained on Dutch hospital data detected 98.9% of identifying text while redacting 0.24% of text outside annotated identifiers.
  • The Dutch synthetic-only model detected 96.1% of identifiers and outperformed the hospital-trained model on primary-care notes in recall (90.3% versus 87.0%).
  • Synthetic training improved robustness to changes in identifier formatting.
  • An English synthetic-only implementation reached 99.7% and 98.9% character-level detection on two synthetic benchmarks, but clinical English performance was not established.

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