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KREL: Automatic Medical Coding via Knowledge-Guided Reasoning over Clinical Evidence with LLMs

arXiv cs.CL Medical/Healthcare AI Xubin Chen, Yipeng Zhou, Wen Sun, Chengkai Huang, Xiaoming Fu, Quan Z. Sheng 2026-08-21
Representative image for KREL: Automatic Medical Coding via Knowledge-Guided Reasoning over Clinical Evidence with LLMs

TL;DR - KREL is an LLM-based framework for automatically assigning ICD codes to clinical notes by combining clinical-evidence reasoning with structured coding guidelines. This knowledge-guided approach aims to reduce hallucinations, improve standards compliance, and handle challenges such as long notes and a large label space.

  • Integrates external ICD coding guidelines directly into the LLM reasoning process.
  • Couples clinical-text interpretation with evidence-based, multi-step code selection.
  • Addresses limitations of extreme multi-label classification and unconstrained generative approaches.
  • Consistently outperforms strong pretrained language model and state-of-the-art LLM baselines on benchmark datasets.

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